| adaptiveRefine(unsigned int _currentIncrement) | MatrixFreePDE< dim, degree > | protected |
| adaptiveRefineCriterion() | MatrixFreePDE< dim, degree > | protectedvirtual |
| applyDirichletBCs() | MatrixFreePDE< dim, degree > | protected |
| applyInitialConditions() | MatrixFreePDE< dim, degree > | protected |
| applyNeumannBCs() | MatrixFreePDE< dim, degree > | protected |
| assembler_lock | MatrixFreePDE< dim, degree > | protected |
| buildFields() | MatrixFreePDE< dim, degree > | |
| call_setRigidBodyModeConstraints(std::vector< int > rigidBodyModeComponents, unsigned int &num_constraints) | setRigidBodyModeConstraintsTest< dim, degree > | inline |
| CIJ_tensor_size | MatrixFreePDE< dim, degree > | protectedstatic |
| computeExplicitRHS() | MatrixFreePDE< dim, degree > | protected |
| computeIntegral(double &integratedField, int index, std::vector< vectorType *> postProcessedSet) | MatrixFreePDE< dim, degree > | protected |
| computeIntegralMF(double &integratedField, int index, const std::vector< vectorType *> postProcessedSet) | MatrixFreePDE< dim, degree > | protected |
| computeInvM() | MatrixFreePDE< dim, degree > | protected |
| computeLaplaceRHS(unsigned int fieldIndex) | MatrixFreePDE< dim, degree > | protected |
| computeNonexplicitRHS() | MatrixFreePDE< dim, degree > | protected |
| computePostProcessedFields(std::vector< vectorType *> &postProcessedSet) | MatrixFreePDE< dim, degree > | protected |
| computing_timer | MatrixFreePDE< dim, degree > | mutableprotected |
| constraintsDirichletSet | MatrixFreePDE< dim, degree > | protected |
| constraintsDirichletSet_nonconst | MatrixFreePDE< dim, degree > | protected |
| constraintsOtherSet | MatrixFreePDE< dim, degree > | protected |
| constraintsOtherSet_nonconst | MatrixFreePDE< dim, degree > | protected |
| current_grain_reassignment | MatrixFreePDE< dim, degree > | protected |
| currentCheckpoint | MatrixFreePDE< dim, degree > | protected |
| currentFieldIndex | MatrixFreePDE< dim, degree > | protected |
| currentIncrement | MatrixFreePDE< dim, degree > | protected |
| currentOutput | MatrixFreePDE< dim, degree > | protected |
| currentTime | MatrixFreePDE< dim, degree > | protected |
| dofHandlersSet | MatrixFreePDE< dim, degree > | protected |
| dofHandlersSet_nonconst | MatrixFreePDE< dim, degree > | protected |
| dU_scalar | MatrixFreePDE< dim, degree > | protected |
| dU_vector | MatrixFreePDE< dim, degree > | protected |
| ellipticFieldIndex | MatrixFreePDE< dim, degree > | protected |
| equationLHS(variableContainer< dim, degree, dealii::VectorizedArray< double > > &variable_list, dealii::Point< dim, dealii::VectorizedArray< double > > q_point_loc) const | setRigidBodyModeConstraintsTest< dim, degree > | inlineprivatevirtual |
| explicitEquationRHS(variableContainer< dim, degree, dealii::VectorizedArray< double > > &variable_list, dealii::Point< dim, dealii::VectorizedArray< double > > q_point_loc) const | setRigidBodyModeConstraintsTest< dim, degree > | inlineprivatevirtual |
| FESet | MatrixFreePDE< dim, degree > | protected |
| fields | MatrixFreePDE< dim, degree > | |
| first_integrated_var_output_complete | MatrixFreePDE< dim, degree > | protected |
| freeEnergyValues | MatrixFreePDE< dim, degree > | protected |
| generatingInitialGuess | MatrixFreePDE< dim, degree > | protected |
| getComponentsWithRigidBodyModes(std::vector< int > &) const | MatrixFreePDE< dim, degree > | protected |
| getExplicitRHS(const MatrixFree< dim, double > &data, std::vector< vectorType *> &dst, const std::vector< vectorType *> &src, const std::pair< unsigned int, unsigned int > &cell_range) const | MatrixFreePDE< dim, degree > | protected |
| getFieldIndex(std::string _name) | MatrixFreePDE< dim, degree > | protected |
| getIntegralMF(const MatrixFree< dim, double > &data, std::vector< vectorType *> &dst, const std::vector< vectorType *> &src, const std::pair< unsigned int, unsigned int > &cell_range) | MatrixFreePDE< dim, degree > | protected |
| getLaplaceLHS(const MatrixFree< dim, double > &data, vectorType &dst, const vectorType &src, const std::pair< unsigned int, unsigned int > &cell_range) const | MatrixFreePDE< dim, degree > | protected |
| getLaplaceRHS(const MatrixFree< dim, double > &data, vectorType &dst, const vectorType &src, const std::pair< unsigned int, unsigned int > &cell_range) const | MatrixFreePDE< dim, degree > | protected |
| getLHS(const MatrixFree< dim, double > &data, vectorType &dst, const vectorType &src, const std::pair< unsigned int, unsigned int > &cell_range) const | MatrixFreePDE< dim, degree > | protected |
| getLocalNucleiList(std::vector< nucleus< dim > > &newnuclei) const | MatrixFreePDE< dim, degree > | protected |
| getNewNuclei() | MatrixFreePDE< dim, degree > | protected |
| getNonexplicitRHS(const MatrixFree< dim, double > &data, std::vector< vectorType *> &dst, const std::vector< vectorType *> &src, const std::pair< unsigned int, unsigned int > &cell_range) const | MatrixFreePDE< dim, degree > | protected |
| getNucleationProbability(variableValueContainer, double, dealii::Point< dim >, unsigned int variable_index) const | MatrixFreePDE< dim, degree > | inlineprotectedvirtual |
| getPostProcessedFields(const dealii::MatrixFree< dim, double > &data, std::vector< vectorType *> &dst, const std::vector< vectorType *> &src, const std::pair< unsigned int, unsigned int > &cell_range) | MatrixFreePDE< dim, degree > | protected |
| getRHS(const MatrixFree< dim, double > &data, std::vector< vectorType *> &dst, const std::vector< vectorType *> &src, const std::pair< unsigned int, unsigned int > &cell_range) const | setRigidBodyModeConstraintsTest< dim, degree > | inlineprivate |
| has_Dirichlet_BCs | MatrixFreePDE< dim, degree > | protected |
| hasExplicitEquation | MatrixFreePDE< dim, degree > | protected |
| hasNonExplicitEquation | MatrixFreePDE< dim, degree > | protected |
| init() | MatrixFreePDE< dim, degree > | virtual |
| initForTests() | MatrixFreePDE< dim, degree > | |
| integral_index | MatrixFreePDE< dim, degree > | protected |
| integrated_postprocessed_fields | MatrixFreePDE< dim, degree > | protected |
| integrated_var | MatrixFreePDE< dim, degree > | protected |
| invM | MatrixFreePDE< dim, degree > | protected |
| isEllipticBVP | MatrixFreePDE< dim, degree > | protected |
| isTimeDependentBVP | MatrixFreePDE< dim, degree > | protected |
| load_checkpoint_fields() | MatrixFreePDE< dim, degree > | protected |
| load_checkpoint_time_info() | MatrixFreePDE< dim, degree > | protected |
| load_checkpoint_triangulation() | MatrixFreePDE< dim, degree > | protected |
| locally_relevant_dofsSet | MatrixFreePDE< dim, degree > | protected |
| locally_relevant_dofsSet_nonconst | MatrixFreePDE< dim, degree > | protected |
| makeTriangulation(parallel::distributed::Triangulation< dim > &) const | MatrixFreePDE< dim, degree > | virtual |
| markBoundaries(parallel::distributed::Triangulation< dim > &) const | MatrixFreePDE< dim, degree > | protected |
| matrixFreeObject | MatrixFreePDE< dim, degree > | protected |
| MatrixFreePDE(userInputParameters< dim >) | MatrixFreePDE< dim, degree > | |
| move_file(const std::string &, const std::string &) | MatrixFreePDE< dim, degree > | protected |
| nonExplicitEquationRHS(variableContainer< dim, degree, dealii::VectorizedArray< double > > &variable_list, dealii::Point< dim, dealii::VectorizedArray< double > > q_point_loc) const | setRigidBodyModeConstraintsTest< dim, degree > | inlineprivatevirtual |
| nuclei | MatrixFreePDE< dim, degree > | protected |
| outputFreeEnergy(const std::vector< double > &freeEnergyValues) const | MatrixFreePDE< dim, degree > | protected |
| outputResults() | MatrixFreePDE< dim, degree > | protected |
| parabolicFieldIndex | MatrixFreePDE< dim, degree > | protected |
| pcout | MatrixFreePDE< dim, degree > | |
| postProcessedFields(const variableContainer< dim, degree, dealii::VectorizedArray< double > > &variable_list, variableContainer< dim, degree, dealii::VectorizedArray< double > > &pp_variable_list, const dealii::Point< dim, dealii::VectorizedArray< double > > q_point_loc) const | MatrixFreePDE< dim, degree > | inlineprotectedvirtual |
| reassignGrains() | MatrixFreePDE< dim, degree > | protected |
| refineGrid() | MatrixFreePDE< dim, degree > | protected |
| refineMeshNearNuclei(std::vector< nucleus< dim > > newnuclei) | MatrixFreePDE< dim, degree > | protected |
| reinit() | MatrixFreePDE< dim, degree > | protected |
| residualSet | MatrixFreePDE< dim, degree > | protected |
| safetyCheckNewNuclei(std::vector< nucleus< dim > > newnuclei, std::vector< unsigned int > &conflict_ids) | MatrixFreePDE< dim, degree > | protected |
| save_checkpoint() | MatrixFreePDE< dim, degree > | protected |
| setBCs() | setRigidBodyModeConstraintsTest< dim, degree > | inline |
| setInitialCondition(const dealii::Point< dim > &p, const unsigned int index, double &scalar_IC, dealii::Vector< double > &vector_IC) | setRigidBodyModeConstraintsTest< dim, degree > | inlinevirtual |
| setNonlinearEqInitialGuess() | MatrixFreePDE< dim, degree > | protected |
| setNonUniformDirichletBCs(const dealii::Point< dim > &p, const unsigned int index, const unsigned int direction, const double time, double &scalar_BC, dealii::Vector< double > &vector_BC) | setRigidBodyModeConstraintsTest< dim, degree > | inlinevirtual |
| setPeriodicity() | MatrixFreePDE< dim, degree > | protected |
| setPeriodicityConstraints(ConstraintMatrix *, const DoFHandler< dim > *) const | MatrixFreePDE< dim, degree > | protected |
| setRigidBodyModeConstraints(const std::vector< int >, ConstraintMatrix *, const DoFHandler< dim > *) const | MatrixFreePDE< dim, degree > | protected |
| setRigidBodyModeConstraintsTest(userInputParameters< dim > _userInputs) | setRigidBodyModeConstraintsTest< dim, degree > | inline |
| simplified_grain_representations | MatrixFreePDE< dim, degree > | protected |
| soltransSet | MatrixFreePDE< dim, degree > | protected |
| solutionSet | MatrixFreePDE< dim, degree > | protected |
| solve() | MatrixFreePDE< dim, degree > | |
| solveIncrement(bool skip_time_dependent) | MatrixFreePDE< dim, degree > | protectedvirtual |
| totalDOFs | MatrixFreePDE< dim, degree > | protected |
| triangulation | MatrixFreePDE< dim, degree > | protected |
| updateNucleiList() | MatrixFreePDE< dim, degree > | protected |
| userInputs | MatrixFreePDE< dim, degree > | protected |
| valuesDirichletSet | MatrixFreePDE< dim, degree > | protected |
| var_attributes | MatrixFreePDE< dim, degree > | protected |
| vector_dofHandler | MatrixFreePDE< dim, degree > | protected |
| vector_fe | MatrixFreePDE< dim, degree > | protected |
| vector_matrixFreeObject | MatrixFreePDE< dim, degree > | protected |
| verify_checkpoint_file_exists(const std::string filename) | MatrixFreePDE< dim, degree > | protected |
| vmult(vectorType &dst, const vectorType &src) const | MatrixFreePDE< dim, degree > | |
| weightedDistanceFromNucleusCenter(const dealii::Point< dim, double > center, const std::vector< double > semiaxes, const dealii::Point< dim, double > q_point_loc, const unsigned int var_index) const | MatrixFreePDE< dim, degree > | protected |
| weightedDistanceFromNucleusCenter(const dealii::Point< dim, double > center, const std::vector< double > semiaxes, const dealii::Point< dim, dealii::VectorizedArray< double > > q_point_loc, const unsigned int var_index) const | MatrixFreePDE< dim, degree > | protected |
| ~MatrixFreePDE() | MatrixFreePDE< dim, degree > | |
| ~setRigidBodyModeConstraintsTest() | setRigidBodyModeConstraintsTest< dim, degree > | inline |
1.8.14