_init() | CASM::PrimClex | private |
add_canonical_supercell(const Lattice &superlat) | CASM::PrimClex | |
add_supercell(const Lattice &superlat) | CASM::PrimClex | |
amount_selected() const | CASM::PrimClex | |
calc_transf_mat(const Lattice &superlat) const | CASM::PrimClex | |
chemical_reference() const | CASM::PrimClex | |
clexulator(const ClexDescription &key) const | CASM::PrimClex | |
composition_axes() const | CASM::PrimClex | |
config_begin() | CASM::PrimClex | |
config_begin() const | CASM::PrimClex | |
config_cbegin() const | CASM::PrimClex | |
config_cend() const | CASM::PrimClex | |
config_const_iterator typedef | CASM::PrimClex | |
config_end() | CASM::PrimClex | |
config_end() const | CASM::PrimClex | |
config_iterator typedef | CASM::PrimClex | |
configuration(const std::string &configname) const | CASM::PrimClex | |
configuration(const std::string &configname) | CASM::PrimClex | |
contains_supercell(std::string scellname, Index &index) const | CASM::PrimClex | |
contains_supercell(const Supercell &scel) const | CASM::PrimClex | |
contains_supercell(const Supercell &scel, Index &index) const | CASM::PrimClex | |
crystallography_tol() const | CASM::PrimClex | inline |
debug_log() const | CASM::Logging | inline |
dir() const | CASM::PrimClex | inline |
eci(const ClexDescription &key) const | CASM::PrimClex | |
err_log() const | CASM::Logging | inline |
generate_supercells(const ScelEnumProps &enum_props) | CASM::PrimClex | |
get_config_list_path() const | CASM::PrimClex | |
get_path() const | CASM::PrimClex | |
get_path(const Index &scel_index) const | CASM::PrimClex | |
get_path(const Index &scel_index, const Index &config_index) const | CASM::PrimClex | |
get_prim() const | CASM::PrimClex | |
get_supercell(Index i) const | CASM::PrimClex | |
get_supercell(Index i) | CASM::PrimClex | |
get_supercell(std::string scellname) const | CASM::PrimClex | |
get_supercell(std::string scellname) | CASM::PrimClex | |
get_supercell(const Lattice &lat) | CASM::PrimClex | |
get_supercell_list() | CASM::PrimClex | |
get_supercell_list() const | CASM::PrimClex | |
has_chemical_reference() const | CASM::PrimClex | |
has_clexulator(const ClexDescription &key) const | CASM::PrimClex | |
has_composition_axes() const | CASM::PrimClex | |
has_eci(const ClexDescription &key) const | CASM::PrimClex | |
has_orbitree(const ClexDescription &key) const | CASM::PrimClex | |
lin_alg_tol() const | CASM::PrimClex | inline |
log() const | CASM::Logging | inline |
Logging(Log &log=default_log(), Log &debug_log=default_log(), Log &err_log=default_err_log()) | CASM::Logging | inline |
m_chem_ref | CASM::PrimClex | private |
m_clexulator | CASM::PrimClex | mutableprivate |
m_comp_converter | CASM::PrimClex | private |
m_dir | CASM::PrimClex | private |
m_dof_manager | CASM::PrimClex | mutableprivate |
m_eci | CASM::PrimClex | mutableprivate |
m_has_composition_axes | CASM::PrimClex | private |
m_nlist | CASM::PrimClex | mutableprivate |
m_orbitree | CASM::PrimClex | mutableprivate |
m_settings | CASM::PrimClex | private |
m_vacancy_allowed | CASM::PrimClex | private |
m_vacancy_index | CASM::PrimClex | private |
name() const | CASM::PrimClex | |
nlist() const | CASM::PrimClex | |
null() | CASM::Logging | inlinestatic |
orbitree(const ClexDescription &key) const | CASM::PrimClex | |
prim | CASM::PrimClex | private |
PrimClex(const Structure &_prim, const Logging &logging=Logging()) | CASM::PrimClex | |
PrimClex(const fs::path &_root, const Logging &logging=Logging()) | CASM::PrimClex | |
print_clex_configurations() | CASM::PrimClex | |
print_enum_info(std::ostream &stream) | CASM::PrimClex | |
print_supercells(std::set< std::string > scel_to_delete={}) const | CASM::PrimClex | |
print_supercells(std::ostream &stream, std::set< std::string > scel_to_delete={}) const | CASM::PrimClex | |
read_all_scel_props(const std::string &JSON_output) | CASM::PrimClex | |
read_config_list() | CASM::PrimClex | |
read_scel_props(int scel_index, const std::string &JSON_output) | CASM::PrimClex | |
read_supercells(std::istream &stream) | CASM::PrimClex | |
refresh(bool read_settings=false, bool read_composition=false, bool read_chem_ref=false, bool read_configs=false, bool clear_clex=false) | CASM::PrimClex | |
root | CASM::PrimClex | private |
selected_config_begin() | CASM::PrimClex | |
selected_config_cbegin() const | CASM::PrimClex | |
selected_config_cend() const | CASM::PrimClex | |
selected_config_end() | CASM::PrimClex | |
set_composition_axes(const CompositionConverter &_converter) | CASM::PrimClex | |
set_global_dof_state(const Configuration &curr_config) const | CASM::PrimClex | inline |
set_local_dof_state(const Configuration &curr_config, Index l) const | CASM::PrimClex | inline |
settings() | CASM::PrimClex | inline |
settings() const | CASM::PrimClex | inline |
shift_vectors() const | CASM::PrimClex | |
supercell_list | CASM::PrimClex | private |
vacancy_allowed() const | CASM::PrimClex | |
vacancy_index() const | CASM::PrimClex | |
write_config_list(std::set< std::string > scel_to_delete={}) | CASM::PrimClex | |